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Chinese hickoryScientific name: Carya cathayensis Sarg.Chinese name: 临安山核桃

Chinese hickory is a speciality of Hangzhou, Zhejiang Province, China, and has a history of more than 500 years since the Ming Dynasty. In Zhejiang and Anhui provinces of China, wild and domesticated Chinese pecans grow only in the moist valley at foothills of Tianmu Mountain, at an altitude of 500-1200 m.

Breeding of Chinese hickory is far behind pecan and plateaued at domestication levels until the past decade. However, this species has nucellar embryonic (apomixis), which are very valuable for inheriting disease resistance traits in production.

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Data summary

We summarize and summarize the data we have in a simple script and present it visually

Choromsome number
32Pcs
Estimated genome size
721.33Mb
Total assembly
706.43Mb
Longest scaffold
4.96Mb
Number of scaffolds
5,449Pcs
N50 scaffold length
1.22Mb
Protein-coding genes
32,907Pcs
Repeat sequence
381.01Mb/53.67%

Expression Atlas

Through cartoon map to show the expression of genes in different parts and different periods, it is more intuitive and friendly.

JBrowse

A new type of genome browser that runs on the web, on the desktop, or embedded into your application, providing more visual genome analysis.

BLAST+

A new type of genome browser that runs on the web, on the desktop, or embedded into your application, providing more visual genome analysis.finds regions of similarity between biological sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance.