Digital Economic Forest Germplasm Resources

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DEFGermplasm

The platform is a comprehensive resource for nut-bearing and wood-producing forest species. It integrates genomic, transcriptomic, and phenotypic data with intuitive visualization tools to support forest genetics research, conservation, and breeding. The platform enhances data accessibility and utilization of forest germplasm resources.

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Comprehensive Data Integration

Access diverse genomic, transcriptomic, and phenotypic data for nut-bearing and wood-producing species.

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Intuitive Analysis Tools

Comprehensive tools for efficient genotypic and phenotypic analysis and visualization.

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User-friendly Interface

Explore data intuitively with interactive and accessible features designed for all users.

The Plant Resources

70+

Genomics data

6+

Tools

4+

Species

Explore Germplasm Resource

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Expression Atlas

Visualize gene expression across tissues and development stages using an intuitive and interactive heatmap display.


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Cross-species Expression Atlas

Explore gene conservation and divergence through cross-species expression heatmaps, offering comparative insights into gene families.


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Phenotypic Data

Examine plant morphology and traits with dynamic visualizations of phenotypic data.


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BLAST+

Identify sequence similarities by comparing nucleotide or protein sequences against databases, with statistical significance provided for precise analysis.

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JBrowse

An interactive genome browser offering fast and interactive exploration of genomic data, featuring smooth navigation and zooming for seamless analysis.

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Hyperspectral variety prediction

Utilize hyperspectral imaging and machine learning to predict and classify pecan varieties.